Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.37□□□□□ -0.43
IghmP01872 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
IghmP01872 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
IghmP01872 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.36□□□□□ -0.43
IghmP01872 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.36□□□□□ -0.43
IghmP01872 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.36□□□□□ -0.43
IghmP01872 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.36□□□□□ -0.43
IghmP01872 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.36□□□□□ -0.43
IghmP01872 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.36□□□□□ -0.43
IghmP01872 Gm11978-201ENSMUST00000122315 466 ntBASIC12.36□□□□□ -0.43
IghmP01872 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.36□□□□□ -0.43
IghmP01872 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
IghmP01872 Gm16215-201ENSMUST00000161990 637 ntBASIC12.36□□□□□ -0.43
IghmP01872 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.36□□□□□ -0.43
IghmP01872 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.36□□□□□ -0.43
IghmP01872 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.36□□□□□ -0.43
IghmP01872 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
IghmP01872 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
IghmP01872 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
IghmP01872 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.36□□□□□ -0.43
IghmP01872 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
IghmP01872 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IghmP01872 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
IghmP01872 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
IghmP01872 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
IghmP01872 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
IghmP01872 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.35□□□□□ -0.43
IghmP01872 Gm6218-201ENSMUST00000219812 628 ntBASIC12.35□□□□□ -0.43
IghmP01872 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.35□□□□□ -0.43
IghmP01872 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
IghmP01872 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.35□□□□□ -0.43
IghmP01872 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.35□□□□□ -0.43
IghmP01872 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
IghmP01872 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
IghmP01872 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
IghmP01872 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
IghmP01872 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
IghmP01872 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
IghmP01872 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.34□□□□□ -0.43
IghmP01872 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IghmP01872 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IghmP01872 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
IghmP01872 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.34□□□□□ -0.43
IghmP01872 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IghmP01872 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.34□□□□□ -0.43
IghmP01872 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IghmP01872 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms