Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.67□□□□□ -0.38
Hcn1O88704 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.67□□□□□ -0.38
Hcn1O88704 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Hcn1O88704 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hcn1O88704 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.67□□□□□ -0.38
Hcn1O88704 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.67□□□□□ -0.38
Hcn1O88704 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Hcn1O88704 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hcn1O88704 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.67□□□□□ -0.38
Hcn1O88704 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.67□□□□□ -0.38
Hcn1O88704 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Hcn1O88704 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hcn1O88704 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.67□□□□□ -0.38
Hcn1O88704 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcn1O88704 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.66□□□□□ -0.38
Hcn1O88704 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hcn1O88704 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.66□□□□□ -0.38
Hcn1O88704 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hcn1O88704 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.66□□□□□ -0.38
Hcn1O88704 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.66□□□□□ -0.38
Hcn1O88704 Gm12091-201ENSMUST00000146791 830 ntBASIC12.66□□□□□ -0.38
Hcn1O88704 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.66□□□□□ -0.38
Hcn1O88704 Gm6745-201ENSMUST00000199216 526 ntBASIC12.66□□□□□ -0.38
Hcn1O88704 Gm9794-201ENSMUST00000202370 423 ntBASIC12.66□□□□□ -0.38
Hcn1O88704 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.66□□□□□ -0.38
Hcn1O88704 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.66□□□□□ -0.38
Hcn1O88704 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hcn1O88704 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcn1O88704 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hcn1O88704 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Hcn1O88704 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hcn1O88704 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Hcn1O88704 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Hcn1O88704 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Rubie-203ENSMUST00000227803 2430 ntBASIC12.65□□□□□ -0.38
Hcn1O88704 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.65□□□□□ -0.38
Hcn1O88704 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.65□□□□□ -0.38
Hcn1O88704 Gm43094-201ENSMUST00000196549 921 ntBASIC12.65□□□□□ -0.38
Hcn1O88704 Gm19078-201ENSMUST00000206311 727 ntBASIC12.65□□□□□ -0.38
Hcn1O88704 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.65□□□□□ -0.38
Hcn1O88704 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.65□□□□□ -0.38
Hcn1O88704 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.65□□□□□ -0.38
Hcn1O88704 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Hcn1O88704 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hcn1O88704 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hcn1O88704 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.64□□□□□ -0.39
Hcn1O88704 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hcn1O88704 Gm11524-201ENSMUST00000119349 807 ntBASIC12.64□□□□□ -0.39
Hcn1O88704 Gm12490-201ENSMUST00000120255 560 ntBASIC12.64□□□□□ -0.39
Hcn1O88704 Gm11424-201ENSMUST00000121929 829 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms