Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Mir497b-201ENSMUST00000093601 125 ntBASIC12.27□□□□□ -0.45
BckdkO55028 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.27□□□□□ -0.45
BckdkO55028 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
BckdkO55028 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
BckdkO55028 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
BckdkO55028 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
BckdkO55028 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BckdkO55028 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.27□□□□□ -0.45
BckdkO55028 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.26□□□□□ -0.45
BckdkO55028 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
BckdkO55028 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
BckdkO55028 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
BckdkO55028 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
BckdkO55028 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
BckdkO55028 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.26□□□□□ -0.45
BckdkO55028 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.26□□□□□ -0.45
BckdkO55028 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.26□□□□□ -0.45
BckdkO55028 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
BckdkO55028 Gm27486-201ENSMUST00000184923 80 ntBASIC12.26□□□□□ -0.45
BckdkO55028 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.26□□□□□ -0.45
BckdkO55028 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.26□□□□□ -0.45
BckdkO55028 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.26□□□□□ -0.45
BckdkO55028 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
BckdkO55028 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
BckdkO55028 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.26□□□□□ -0.45
BckdkO55028 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BckdkO55028 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.26□□□□□ -0.45
BckdkO55028 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
BckdkO55028 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
BckdkO55028 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.25□□□□□ -0.45
BckdkO55028 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
BckdkO55028 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
BckdkO55028 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
BckdkO55028 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.25□□□□□ -0.45
BckdkO55028 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.25□□□□□ -0.45
BckdkO55028 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
BckdkO55028 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
BckdkO55028 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.25□□□□□ -0.45
BckdkO55028 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms