Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Gm23949-201ENSMUST00000104027 127 ntBASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Gm13035-201ENSMUST00000117496 342 ntBASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Gm43416-201ENSMUST00000201916 1015 ntBASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scaf11E9PZM7 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Mir680-2-201ENSMUST00000102163 110 ntBASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Gm23251-201ENSMUST00000103773 110 ntBASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC18.09■□□□□ 0.49
Scaf11E9PZM7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Gm25951-201ENSMUST00000175330 64 ntBASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC18.09■□□□□ 0.49
Scaf11E9PZM7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Scaf11E9PZM7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Gm14058-201ENSMUST00000116082 735 ntBASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Gm15711-201ENSMUST00000118889 535 ntBASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Gm21027-201ENSMUST00000219300 1236 ntBASIC18.08■□□□□ 0.49
Scaf11E9PZM7 AC159205.5-202ENSMUST00000224849 386 ntBASIC18.08■□□□□ 0.49
Scaf11E9PZM7 AC167013.1-201ENSMUST00000228592 202 ntBASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scaf11E9PZM7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scaf11E9PZM7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC18.08■□□□□ 0.48
Scaf11E9PZM7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scaf11E9PZM7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scaf11E9PZM7 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC18.08■□□□□ 0.48
Scaf11E9PZM7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scaf11E9PZM7 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scaf11E9PZM7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scaf11E9PZM7 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm11941-201ENSMUST00000119904 610 ntBASIC18.07■□□□□ 0.48
Scaf11E9PZM7 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm5616-201ENSMUST00000165252 384 ntBASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm8741-201ENSMUST00000174736 384 ntBASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm29615-201ENSMUST00000185371 697 ntBASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm28224-201ENSMUST00000186078 697 ntBASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm29001-201ENSMUST00000186177 697 ntBASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm28292-201ENSMUST00000186593 697 ntBASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm28101-201ENSMUST00000187608 697 ntBASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm29076-201ENSMUST00000187689 697 ntBASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm28302-201ENSMUST00000187931 697 ntBASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm28646-201ENSMUST00000188220 697 ntBASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm28205-201ENSMUST00000189177 697 ntBASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm29032-201ENSMUST00000189797 697 ntBASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm28695-201ENSMUST00000190300 697 ntBASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scaf11E9PZM7 Gm37448-201ENSMUST00000192795 697 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms