Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a3E9PWQ3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Gm22388-201ENSMUST00000158194 248 ntBASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Gm24954-201ENSMUST00000178831 110 ntBASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Gm43962-201ENSMUST00000203898 190 ntBASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a3E9PWQ3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm12337-201ENSMUST00000119634 400 ntBASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm22146-201ENSMUST00000157397 288 ntBASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm8824-201ENSMUST00000182962 990 ntBASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm15352-201ENSMUST00000118696 270 ntBASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm23596-201ENSMUST00000104304 132 ntBASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm23045-201ENSMUST00000175041 96 ntBASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col6a3E9PWQ3 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.79□□□□□ -0.36
Col6a3E9PWQ3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a3E9PWQ3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col6a3E9PWQ3 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a3E9PWQ3 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a3E9PWQ3 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a3E9PWQ3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.79□□□□□ -0.36
Col6a3E9PWQ3 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.79□□□□□ -0.36
Col6a3E9PWQ3 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Col6a3E9PWQ3 Gm18514-201ENSMUST00000218980 436 ntBASIC12.79□□□□□ -0.36
Col6a3E9PWQ3 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a3E9PWQ3 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a3E9PWQ3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col6a3E9PWQ3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms