Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-2D3Z4R4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-2D3Z4R4 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkx6-2D3Z4R4 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-2D3Z4R4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-2D3Z4R4 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-2D3Z4R4 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-2D3Z4R4 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-2D3Z4R4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-2D3Z4R4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx6-2D3Z4R4 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Nkx6-2D3Z4R4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Gm7935-201ENSMUST00000100555 1278 ntBASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Gm4535-201ENSMUST00000182274 558 ntBASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Gm10355-201ENSMUST00000097146 517 ntBASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx6-2D3Z4R4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Mir6982-201ENSMUST00000184354 68 ntBASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkx6-2D3Z4R4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms