Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC17.84■□□□□ 0.45
Tmf1B9EKI3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tmf1B9EKI3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tmf1B9EKI3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tmf1B9EKI3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Tmf1B9EKI3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Tmf1B9EKI3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tmf1B9EKI3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC17.84■□□□□ 0.45
Tmf1B9EKI3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tmf1B9EKI3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC17.84■□□□□ 0.45
Tmf1B9EKI3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tmf1B9EKI3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tmf1B9EKI3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tmf1B9EKI3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tmf1B9EKI3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC17.83■□□□□ 0.45
Tmf1B9EKI3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tmf1B9EKI3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Tmf1B9EKI3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tmf1B9EKI3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tmf1B9EKI3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tmf1B9EKI3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.83■□□□□ 0.45
Tmf1B9EKI3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Gm5620-201ENSMUST00000077991 1348 ntBASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmf1B9EKI3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Gm8706-201ENSMUST00000197372 1491 ntBASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Mir686-201ENSMUST00000102174 109 ntBASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Gm23931-201ENSMUST00000103842 109 ntBASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Mir3102-201ENSMUST00000175555 104 ntBASIC17.82■□□□□ 0.44
Tmf1B9EKI3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Gm27514-201ENSMUST00000183692 110 ntBASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Gm43179-201ENSMUST00000198797 275 ntBASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Gm44891-201ENSMUST00000208817 2223 ntBASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC17.82■□□□□ 0.44
Tmf1B9EKI3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Gm5896-201ENSMUST00000189662 1024 ntBASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC17.81■□□□□ 0.44
Tmf1B9EKI3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms