Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col4a6B1AVK5 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.29□□□□□ -0.28
Col4a6B1AVK5 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Sybu-209ENSMUST00000228639 4113 ntBASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col4a6B1AVK5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Gm23949-201ENSMUST00000104027 127 ntBASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Gm45219-201ENSMUST00000205602 465 ntBASIC13.28□□□□□ -0.28
Col4a6B1AVK5 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.28□□□□□ -0.28
Col4a6B1AVK5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Gm13813-201ENSMUST00000120998 787 ntBASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Gm6407-201ENSMUST00000176468 549 ntBASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Gm27438-201ENSMUST00000183480 110 ntBASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Gm27530-201ENSMUST00000184096 98 ntBASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col4a6B1AVK5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms