Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 AW822252-206ENSMUST00000208904 237 ntBASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav12d-1A0N8R0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Gm27430-201ENSMUST00000184585 107 ntBASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Gm44333-201ENSMUST00000197168 107 ntBASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms