Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
Upk3aQ9JKX8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.71□□□□□ -0.38
Upk3aQ9JKX8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk3aQ9JKX8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk3aQ9JKX8 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.71□□□□□ -0.38
Upk3aQ9JKX8 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Upk3aQ9JKX8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Upk3aQ9JKX8 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk3aQ9JKX8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk3aQ9JKX8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Upk3aQ9JKX8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Mir686-201ENSMUST00000102174 109 ntBASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Gm24644-201ENSMUST00000157114 139 ntBASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Gm17150-201ENSMUST00000165577 381 ntBASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Gm27331-201ENSMUST00000183705 60 ntBASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Gm6458-201ENSMUST00000211573 635 ntBASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk3aQ9JKX8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Gm13369-201ENSMUST00000119442 987 ntBASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Gm8602-201ENSMUST00000184045 607 ntBASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Gm29649-201ENSMUST00000185649 419 ntBASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms