Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup50Q9JIH2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup50Q9JIH2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup50Q9JIH2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Nup50Q9JIH2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup50Q9JIH2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Nup50Q9JIH2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup50Q9JIH2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup50Q9JIH2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup50Q9JIH2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup50Q9JIH2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Gm11978-201ENSMUST00000122315 466 ntBASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nup50Q9JIH2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.94□□□□□ -0.18
Nup50Q9JIH2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nup50Q9JIH2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nup50Q9JIH2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nup50Q9JIH2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nup50Q9JIH2 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.94□□□□□ -0.18
Nup50Q9JIH2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.94□□□□□ -0.18
Nup50Q9JIH2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nup50Q9JIH2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup50Q9JIH2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup50Q9JIH2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup50Q9JIH2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Nup50Q9JIH2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup50Q9JIH2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nup50Q9JIH2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup50Q9JIH2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Nup50Q9JIH2 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.94□□□□□ -0.18
Nup50Q9JIH2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms