Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Gm22189-201ENSMUST00000103822 86 ntBASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Gm15376-201ENSMUST00000122258 783 ntBASIC12.81□□□□□ -0.36
Cstf3Q99LI7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cstf3Q99LI7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.8□□□□□ -0.36
Cstf3Q99LI7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cstf3Q99LI7 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Gm5354-201ENSMUST00000182417 973 ntBASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cstf3Q99LI7 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms