Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.08□□□□□ -0.16
TraipQ8VIG6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TraipQ8VIG6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TraipQ8VIG6 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Gm6754-201ENSMUST00000117124 913 ntBASIC14.07□□□□□ -0.16
TraipQ8VIG6 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.07□□□□□ -0.16
TraipQ8VIG6 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Gm3890-201ENSMUST00000182416 207 ntBASIC14.07□□□□□ -0.16
TraipQ8VIG6 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.07□□□□□ -0.16
TraipQ8VIG6 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Gm18584-201ENSMUST00000203098 964 ntBASIC14.07□□□□□ -0.16
TraipQ8VIG6 Gm5781-201ENSMUST00000219792 443 ntBASIC14.07□□□□□ -0.16
TraipQ8VIG6 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Gm45501-201ENSMUST00000211468 2526 ntBASIC14.07□□□□□ -0.16
TraipQ8VIG6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TraipQ8VIG6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Gm7809-201ENSMUST00000153199 742 ntBASIC14.06□□□□□ -0.16
TraipQ8VIG6 Gm22121-201ENSMUST00000175148 54 ntBASIC14.06□□□□□ -0.16
TraipQ8VIG6 Mir8109-201ENSMUST00000184375 117 ntBASIC14.06□□□□□ -0.16
TraipQ8VIG6 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Gm38266-201ENSMUST00000194931 421 ntBASIC14.06□□□□□ -0.16
TraipQ8VIG6 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Olfr284-202ENSMUST00000206647 966 ntBASIC14.06□□□□□ -0.16
TraipQ8VIG6 Gm6458-201ENSMUST00000211573 635 ntBASIC14.06□□□□□ -0.16
TraipQ8VIG6 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Gm45930-201ENSMUST00000221330 292 ntBASIC14.06□□□□□ -0.16
TraipQ8VIG6 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TraipQ8VIG6 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.05□□□□□ -0.16
TraipQ8VIG6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TraipQ8VIG6 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms