Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.8□□□□□ -0.36
Pcdh18Q8VHR0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh18Q8VHR0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh18Q8VHR0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdh18Q8VHR0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh18Q8VHR0 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh18Q8VHR0 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdh18Q8VHR0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh18Q8VHR0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh18Q8VHR0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh18Q8VHR0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh18Q8VHR0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdh18Q8VHR0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh18Q8VHR0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdh18Q8VHR0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Mir449b-201ENSMUST00000104833 80 ntBASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Gm2445-201ENSMUST00000182798 989 ntBASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Gm6916-202ENSMUST00000205523 195 ntBASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Gm16476-201ENSMUST00000221544 139 ntBASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh18Q8VHR0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Gm6415-201ENSMUST00000118488 348 ntBASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh18Q8VHR0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdh18Q8VHR0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdh18Q8VHR0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh18Q8VHR0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdh18Q8VHR0 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.77□□□□□ -0.36
Pcdh18Q8VHR0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh18Q8VHR0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.77□□□□□ -0.36
Pcdh18Q8VHR0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Pcdh18Q8VHR0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms