Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Gm21854-201ENSMUST00000179901 471 ntBASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Gm5425-201ENSMUST00000214125 459 ntBASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4aQ8VEJ9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Mir1982-201ENSMUST00000157368 74 ntBASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Gm5035-201ENSMUST00000215581 927 ntBASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vps4aQ8VEJ9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms