Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdt1Q8R4E9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Gm7399-201ENSMUST00000032395 858 ntBASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cdt1Q8R4E9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
Cdt1Q8R4E9 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.83□□□□□ -0.35
Cdt1Q8R4E9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdt1Q8R4E9 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Gm5370-201ENSMUST00000187187 574 ntBASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Gm29127-201ENSMUST00000188304 517 ntBASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdt1Q8R4E9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdt1Q8R4E9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms