Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.84□□□□□ -0.35
Zc3h3Q8CHP0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Zc3h3Q8CHP0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Zc3h3Q8CHP0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Zc3h3Q8CHP0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Zc3h3Q8CHP0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Zc3h3Q8CHP0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Zc3h3Q8CHP0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Gm12795-201ENSMUST00000117594 539 ntBASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Gm13492-201ENSMUST00000119772 665 ntBASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Zc3h3Q8CHP0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Gm12165-201ENSMUST00000117047 342 ntBASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Gm13045-201ENSMUST00000119019 712 ntBASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Gm11450-201ENSMUST00000121144 333 ntBASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Gm14460-201ENSMUST00000121511 639 ntBASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Gm10051-201ENSMUST00000145209 414 ntBASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Gm37666-201ENSMUST00000194110 866 ntBASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Zc3h3Q8CHP0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Zc3h3Q8CHP0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Zc3h3Q8CHP0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms