Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm5837-201ENSMUST00000191844 1369 ntBASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Mir7221-201ENSMUST00000184009 72 ntBASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm8597-201ENSMUST00000191525 1109 ntBASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm29741-201ENSMUST00000192667 421 ntBASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm20049-201ENSMUST00000219950 730 ntBASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 AC123645.1-201ENSMUST00000228469 605 ntBASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC9.92□□□□□ -0.82
Hist3h2bbQ8CGP0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Gm5874-201ENSMUST00000096101 508 ntBASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hist3h2bbQ8CGP0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms