Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Alx1Q8C8B0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Gm12363-201ENSMUST00000122250 668 ntBASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Gm22121-201ENSMUST00000175148 54 ntBASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Gm27514-201ENSMUST00000183692 110 ntBASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Gm19163-201ENSMUST00000223313 780 ntBASIC15.39■□□□□ 0.05
Alx1Q8C8B0 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.39■□□□□ 0.05
Alx1Q8C8B0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Alx1Q8C8B0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Gm12291-201ENSMUST00000121627 311 ntBASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.37■□□□□ 0.05
Alx1Q8C8B0 Gm26185-201ENSMUST00000157692 266 ntBASIC15.37■□□□□ 0.05
Alx1Q8C8B0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 103.4 ms