Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tsen54Q8C2A2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Tsen54Q8C2A2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Tsen54Q8C2A2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tsen54Q8C2A2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Gm15920-201ENSMUST00000118998 402 ntBASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Gm25948-201ENSMUST00000175334 112 ntBASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tsen54Q8C2A2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms