Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Gm19078-201ENSMUST00000206311 727 ntBASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpsf4Q8BQZ5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cpsf4Q8BQZ5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.83□□□□□ -0.35
Cpsf4Q8BQZ5 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cpsf4Q8BQZ5 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.83□□□□□ -0.35
Cpsf4Q8BQZ5 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cpsf4Q8BQZ5 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Mir7654-201ENSMUST00000185082 70 ntBASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4Q8BQZ5 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms