Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm17271-201ENSMUST00000165535 355 ntBASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Gm38225-201ENSMUST00000194001 393 ntBASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 AC158529.1-201ENSMUST00000223618 239 ntBASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Mir125a-201ENSMUST00000083545 68 ntBASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smco3Q8BQM7 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Gm6443-201ENSMUST00000203599 874 ntBASIC10.87□□□□□ -0.67
Smco3Q8BQM7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smco3Q8BQM7 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Smco3Q8BQM7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms