Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sfr1Q8BP27 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Gm5745-201ENSMUST00000183748 313 ntBASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Gm29608-201ENSMUST00000190444 463 ntBASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Gm8463-201ENSMUST00000208573 613 ntBASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Gm17794-201ENSMUST00000220252 955 ntBASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sfr1Q8BP27 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Gm18041-201ENSMUST00000218210 618 ntBASIC13.5□□□□□ -0.25
Sfr1Q8BP27 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sfr1Q8BP27 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Gm18473-201ENSMUST00000220543 868 ntBASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Itm2b-204ENSMUST00000228637 783 ntBASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Gm5356-201ENSMUST00000093326 615 ntBASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sfr1Q8BP27 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms