Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ubfd1Q78JW9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubfd1Q78JW9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubfd1Q78JW9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ubfd1Q78JW9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubfd1Q78JW9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.88□□□□□ -0.35
Ubfd1Q78JW9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ubfd1Q78JW9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubfd1Q78JW9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ubfd1Q78JW9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ubfd1Q78JW9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubfd1Q78JW9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm16379-201ENSMUST00000161469 348 ntBASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm25927-201ENSMUST00000175058 117 ntBASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm8762-201ENSMUST00000193486 339 ntBASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm37008-201ENSMUST00000195712 319 ntBASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm6458-201ENSMUST00000211573 635 ntBASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm45880-201ENSMUST00000213041 853 ntBASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gm19309-201ENSMUST00000218295 205 ntBASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubfd1Q78JW9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Mir7221-201ENSMUST00000184009 72 ntBASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Gm4768-201ENSMUST00000206199 686 ntBASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Gm18054-201ENSMUST00000207539 555 ntBASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubfd1Q78JW9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms