Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.76□□□□□ -0.37
Sdc3Q64519 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.76□□□□□ -0.37
Sdc3Q64519 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.76□□□□□ -0.37
Sdc3Q64519 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Sdc3Q64519 Gm17330-201ENSMUST00000221047 165 ntBASIC12.76□□□□□ -0.37
Sdc3Q64519 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.76□□□□□ -0.37
Sdc3Q64519 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.76□□□□□ -0.37
Sdc3Q64519 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sdc3Q64519 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.75□□□□□ -0.37
Sdc3Q64519 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 Gm12390-201ENSMUST00000117897 397 ntBASIC12.75□□□□□ -0.37
Sdc3Q64519 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.75□□□□□ -0.37
Sdc3Q64519 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.75□□□□□ -0.37
Sdc3Q64519 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.75□□□□□ -0.37
Sdc3Q64519 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.75□□□□□ -0.37
Sdc3Q64519 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 Gm44719-201ENSMUST00000206404 149 ntBASIC12.75□□□□□ -0.37
Sdc3Q64519 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.75□□□□□ -0.37
Sdc3Q64519 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.75□□□□□ -0.37
Sdc3Q64519 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.75□□□□□ -0.37
Sdc3Q64519 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sdc3Q64519 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.75□□□□□ -0.37
Sdc3Q64519 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sdc3Q64519 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sdc3Q64519 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.74□□□□□ -0.37
Sdc3Q64519 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sdc3Q64519 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sdc3Q64519 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.74□□□□□ -0.37
Sdc3Q64519 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.74□□□□□ -0.37
Sdc3Q64519 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.74□□□□□ -0.37
Sdc3Q64519 Mir7085-201ENSMUST00000184353 66 ntBASIC12.74□□□□□ -0.37
Sdc3Q64519 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.74□□□□□ -0.37
Sdc3Q64519 Gm18062-201ENSMUST00000208020 547 ntBASIC12.74□□□□□ -0.37
Sdc3Q64519 Gm18055-201ENSMUST00000208254 547 ntBASIC12.74□□□□□ -0.37
Sdc3Q64519 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.74□□□□□ -0.37
Sdc3Q64519 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sdc3Q64519 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sdc3Q64519 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.73□□□□□ -0.37
Sdc3Q64519 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.73□□□□□ -0.37
Sdc3Q64519 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.73□□□□□ -0.37
Sdc3Q64519 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.73□□□□□ -0.37
Sdc3Q64519 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms