Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim27Q62158 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim27Q62158 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trim27Q62158 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trim27Q62158 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim27Q62158 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.22■□□□□ 0.19
Trim27Q62158 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim27Q62158 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim27Q62158 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim27Q62158 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim27Q62158 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim27Q62158 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim27Q62158 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim27Q62158 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim27Q62158 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim27Q62158 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim27Q62158 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim27Q62158 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim27Q62158 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim27Q62158 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim27Q62158 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim27Q62158 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim27Q62158 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim27Q62158 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim27Q62158 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim27Q62158 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim27Q62158 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim27Q62158 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim27Q62158 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim27Q62158 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim27Q62158 Gm12490-201ENSMUST00000120255 560 ntBASIC16.21■□□□□ 0.19
Trim27Q62158 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC16.21■□□□□ 0.19
Trim27Q62158 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim27Q62158 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim27Q62158 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim27Q62158 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim27Q62158 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim27Q62158 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim27Q62158 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim27Q62158 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim27Q62158 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.21■□□□□ 0.18
Trim27Q62158 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim27Q62158 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim27Q62158 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Trim27Q62158 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim27Q62158 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim27Q62158 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim27Q62158 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim27Q62158 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim27Q62158 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim27Q62158 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.2■□□□□ 0.18
Trim27Q62158 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim27Q62158 AC154747.3-201ENSMUST00000224471 3470 ntBASIC16.2■□□□□ 0.18
Trim27Q62158 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim27Q62158 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim27Q62158 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.2■□□□□ 0.18
Trim27Q62158 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim27Q62158 Gm38671-201ENSMUST00000200573 130 ntBASIC16.2■□□□□ 0.18
Trim27Q62158 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim27Q62158 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim27Q62158 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim27Q62158 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim27Q62158 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim27Q62158 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim27Q62158 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim27Q62158 Gm37844-201ENSMUST00000192473 4097 ntBASIC16.19■□□□□ 0.18
Trim27Q62158 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.19■□□□□ 0.18
Trim27Q62158 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim27Q62158 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC16.19■□□□□ 0.18
Trim27Q62158 Gm11803-201ENSMUST00000119966 444 ntBASIC16.19■□□□□ 0.18
Trim27Q62158 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim27Q62158 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.19■□□□□ 0.18
Trim27Q62158 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Trim27Q62158 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.19■□□□□ 0.18
Trim27Q62158 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.19■□□□□ 0.18
Trim27Q62158 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms