Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.59□□□□□ -0.39
Rai1Q61818 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Rai1Q61818 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.59□□□□□ -0.39
Rai1Q61818 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Rai1Q61818 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.59□□□□□ -0.39
Rai1Q61818 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.59□□□□□ -0.39
Rai1Q61818 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.59□□□□□ -0.39
Rai1Q61818 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Gm24749-201ENSMUST00000157838 343 ntBASIC12.59□□□□□ -0.39
Rai1Q61818 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.59□□□□□ -0.39
Rai1Q61818 Gm28450-201ENSMUST00000187349 638 ntBASIC12.59□□□□□ -0.39
Rai1Q61818 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.59□□□□□ -0.39
Rai1Q61818 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.59□□□□□ -0.39
Rai1Q61818 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.58□□□□□ -0.39
Rai1Q61818 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rai1Q61818 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.58□□□□□ -0.39
Rai1Q61818 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Rai1Q61818 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.58□□□□□ -0.4
Rai1Q61818 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Gm22902-201ENSMUST00000158488 302 ntBASIC12.58□□□□□ -0.4
Rai1Q61818 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.58□□□□□ -0.4
Rai1Q61818 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.58□□□□□ -0.4
Rai1Q61818 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.58□□□□□ -0.4
Rai1Q61818 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.58□□□□□ -0.4
Rai1Q61818 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.58□□□□□ -0.4
Rai1Q61818 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rai1Q61818 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Rai1Q61818 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rai1Q61818 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.57□□□□□ -0.4
Rai1Q61818 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.57□□□□□ -0.4
Rai1Q61818 Gm14263-201ENSMUST00000117955 746 ntBASIC12.57□□□□□ -0.4
Rai1Q61818 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Rai1Q61818 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Rai1Q61818 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.57□□□□□ -0.4
Rai1Q61818 Gm8018-201ENSMUST00000173536 789 ntBASIC12.57□□□□□ -0.4
Rai1Q61818 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.57□□□□□ -0.4
Rai1Q61818 Gm8959-201ENSMUST00000213150 571 ntBASIC12.57□□□□□ -0.4
Rai1Q61818 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rai1Q61818 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.57□□□□□ -0.4
Rai1Q61818 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rai1Q61818 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms