Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm6991-201ENSMUST00000218475 1178 ntBASIC14.43□□□□□ -0.1
Cln3Q61124 Gm18515-201ENSMUST00000219755 797 ntBASIC14.43□□□□□ -0.1
Cln3Q61124 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.43□□□□□ -0.1
Cln3Q61124 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.43□□□□□ -0.1
Cln3Q61124 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cln3Q61124 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.43□□□□□ -0.1
Cln3Q61124 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cln3Q61124 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Cln3Q61124 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cln3Q61124 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cln3Q61124 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.42□□□□□ -0.1
Cln3Q61124 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Cln3Q61124 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.42□□□□□ -0.1
Cln3Q61124 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Mir3547-201ENSMUST00000175461 88 ntBASIC14.42□□□□□ -0.1
Cln3Q61124 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.42□□□□□ -0.1
Cln3Q61124 Gm38317-201ENSMUST00000195564 343 ntBASIC14.42□□□□□ -0.1
Cln3Q61124 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.42□□□□□ -0.1
Cln3Q61124 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.42□□□□□ -0.1
Cln3Q61124 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cln3Q61124 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Cln3Q61124 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cln3Q61124 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cln3Q61124 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cln3Q61124 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Daam2-202ENSMUST00000224595 1926 ntBASIC14.41□□□□□ -0.1
Cln3Q61124 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.41□□□□□ -0.1
Cln3Q61124 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.41□□□□□ -0.1
Cln3Q61124 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.41□□□□□ -0.1
Cln3Q61124 Gm14017-201ENSMUST00000121934 386 ntBASIC14.41□□□□□ -0.1
Cln3Q61124 Gm13570-201ENSMUST00000140763 309 ntBASIC14.41□□□□□ -0.1
Cln3Q61124 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Cln3Q61124 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.41□□□□□ -0.1
Cln3Q61124 Gm2260-201ENSMUST00000184965 657 ntBASIC14.41□□□□□ -0.1
Cln3Q61124 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.41□□□□□ -0.1
Cln3Q61124 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.41□□□□□ -0.1
Cln3Q61124 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.41□□□□□ -0.1
Cln3Q61124 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Cln3Q61124 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Cln3Q61124 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cln3Q61124 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cln3Q61124 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.4□□□□□ -0.1
Cln3Q61124 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cln3Q61124 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cln3Q61124 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms