Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Gm38002-201ENSMUST00000193255 180 ntBASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.07□□□□□ -0.16
Shroom1Q5SX79 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Gm10268-201ENSMUST00000085340 555 ntBASIC14.06□□□□□ -0.16
Shroom1Q5SX79 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Shroom1Q5SX79 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms