Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Gm8597-201ENSMUST00000191525 1109 ntBASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Olfr286-202ENSMUST00000205305 969 ntBASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Gm28323-201ENSMUST00000186817 2499 ntBASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trav3-3Q5R1C3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Gm27177-202ENSMUST00000183514 2703 ntBASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3-3Q5R1C3 Gm13233-201ENSMUST00000118760 1443 ntBASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Gm13244-201ENSMUST00000118855 1446 ntBASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms