Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Snx27Q3UHD6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snx27Q3UHD6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snx27Q3UHD6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snx27Q3UHD6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Gm17208-201ENSMUST00000168388 535 ntBASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Gm3890-201ENSMUST00000182416 207 ntBASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Gm42627-201ENSMUST00000197347 224 ntBASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snx27Q3UHD6 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Gm27516-201ENSMUST00000184237 98 ntBASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Gm32025-201ENSMUST00000217960 307 ntBASIC14.25□□□□□ -0.13
Snx27Q3UHD6 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.25□□□□□ -0.13
Snx27Q3UHD6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.24□□□□□ -0.13
Snx27Q3UHD6 Gm38158-201ENSMUST00000194617 339 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms