Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col17a1Q07563 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col17a1Q07563 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col17a1Q07563 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col17a1Q07563 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Col17a1Q07563 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Col17a1Q07563 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC19.81■□□□□ 0.76
Col17a1Q07563 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col17a1Q07563 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col17a1Q07563 Gm43184-201ENSMUST00000197247 542 ntBASIC19.81■□□□□ 0.76
Col17a1Q07563 CT485606.1-201ENSMUST00000213187 878 ntBASIC19.81■□□□□ 0.76
Col17a1Q07563 AC154252.2-201ENSMUST00000223593 767 ntBASIC19.81■□□□□ 0.76
Col17a1Q07563 AC151275.1-201ENSMUST00000224870 585 ntBASIC19.81■□□□□ 0.76
Col17a1Q07563 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col17a1Q07563 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col17a1Q07563 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col17a1Q07563 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col17a1Q07563 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col17a1Q07563 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col17a1Q07563 Gm6198-201ENSMUST00000191337 2929 ntBASIC19.81■□□□□ 0.76
Col17a1Q07563 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC19.81■□□□□ 0.76
Col17a1Q07563 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col17a1Q07563 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col17a1Q07563 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col17a1Q07563 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Col17a1Q07563 Gm37411-201ENSMUST00000194180 2282 ntBASIC19.8■□□□□ 0.76
Col17a1Q07563 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col17a1Q07563 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Col17a1Q07563 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC19.8■□□□□ 0.76
Col17a1Q07563 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col17a1Q07563 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC19.8■□□□□ 0.76
Col17a1Q07563 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC19.8■□□□□ 0.76
Col17a1Q07563 Gm44421-201ENSMUST00000205064 1221 ntBASIC19.8■□□□□ 0.76
Col17a1Q07563 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC19.8■□□□□ 0.76
Col17a1Q07563 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col17a1Q07563 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC19.8■□□□□ 0.76
Col17a1Q07563 AC124433.1-201ENSMUST00000224483 1063 ntBASIC19.8■□□□□ 0.76
Col17a1Q07563 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col17a1Q07563 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col17a1Q07563 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col17a1Q07563 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col17a1Q07563 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col17a1Q07563 AC154412.1-201ENSMUST00000226540 2786 ntBASIC19.8■□□□□ 0.76
Col17a1Q07563 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC19.8■□□□□ 0.76
Col17a1Q07563 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col17a1Q07563 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col17a1Q07563 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col17a1Q07563 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.8■□□□□ 0.76
Col17a1Q07563 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Col17a1Q07563 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Col17a1Q07563 Gm11989-201ENSMUST00000117240 672 ntBASIC19.79■□□□□ 0.76
Col17a1Q07563 Gm11509-201ENSMUST00000117358 325 ntBASIC19.79■□□□□ 0.76
Col17a1Q07563 Gm11362-201ENSMUST00000118838 850 ntBASIC19.79■□□□□ 0.76
Col17a1Q07563 Gm12712-201ENSMUST00000120676 801 ntBASIC19.79■□□□□ 0.76
Col17a1Q07563 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 Gm8584-201ENSMUST00000171982 758 ntBASIC19.79■□□□□ 0.76
Col17a1Q07563 Gm19587-201ENSMUST00000191395 545 ntBASIC19.79■□□□□ 0.76
Col17a1Q07563 Ighv1-2-201ENSMUST00000195325 378 ntBASIC19.79■□□□□ 0.76
Col17a1Q07563 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 Gm18968-201ENSMUST00000221319 862 ntBASIC19.79■□□□□ 0.76
Col17a1Q07563 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Col17a1Q07563 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Col17a1Q07563 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Col17a1Q07563 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col17a1Q07563 Gm25076-201ENSMUST00000104098 132 ntBASIC19.79■□□□□ 0.76
Col17a1Q07563 Gm12419-201ENSMUST00000116649 636 ntBASIC19.79■□□□□ 0.76
Col17a1Q07563 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC19.79■□□□□ 0.76
Col17a1Q07563 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC19.79■□□□□ 0.76
Col17a1Q07563 Gm6652-201ENSMUST00000186414 1070 ntBASIC19.79■□□□□ 0.76
Col17a1Q07563 Ighv4-2-201ENSMUST00000192975 362 ntBASIC19.79■□□□□ 0.76
Col17a1Q07563 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC19.79■□□□□ 0.76
Col17a1Q07563 Gm43912-201ENSMUST00000204352 538 ntBASIC19.79■□□□□ 0.76
Col17a1Q07563 Gm3433-201ENSMUST00000210149 1058 ntBASIC19.79■□□□□ 0.76
Col17a1Q07563 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC19.78■□□□□ 0.76
Col17a1Q07563 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.78■□□□□ 0.76
Col17a1Q07563 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Col17a1Q07563 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Col17a1Q07563 AC139350.1-201ENSMUST00000227064 1594 ntBASIC19.78■□□□□ 0.76
Col17a1Q07563 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Col17a1Q07563 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col17a1Q07563 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms