Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.09□□□□□ -0.63
Npas1P97459 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.09□□□□□ -0.63
Npas1P97459 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Npas1P97459 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Npas1P97459 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.09□□□□□ -0.63
Npas1P97459 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Npas1P97459 Gm12260-201ENSMUST00000122447 411 ntBASIC11.09□□□□□ -0.63
Npas1P97459 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Npas1P97459 Gm18733-201ENSMUST00000173950 856 ntBASIC11.09□□□□□ -0.63
Npas1P97459 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.09□□□□□ -0.63
Npas1P97459 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.09□□□□□ -0.63
Npas1P97459 Mzt1-203ENSMUST00000227948 952 ntBASIC11.09□□□□□ -0.63
Npas1P97459 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.09□□□□□ -0.63
Npas1P97459 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.09□□□□□ -0.63
Npas1P97459 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.09□□□□□ -0.63
Npas1P97459 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
Npas1P97459 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npas1P97459 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
Npas1P97459 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.08□□□□□ -0.63
Npas1P97459 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Npas1P97459 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Npas1P97459 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Npas1P97459 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Npas1P97459 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Npas1P97459 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Npas1P97459 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Npas1P97459 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.08□□□□□ -0.64
Npas1P97459 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.08□□□□□ -0.64
Npas1P97459 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Npas1P97459 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Mir3113-201ENSMUST00000175478 76 ntBASIC11.08□□□□□ -0.64
Npas1P97459 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.08□□□□□ -0.64
Npas1P97459 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Gm18057-201ENSMUST00000208220 503 ntBASIC11.08□□□□□ -0.64
Npas1P97459 Gm18027-201ENSMUST00000218947 619 ntBASIC11.08□□□□□ -0.64
Npas1P97459 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.08□□□□□ -0.64
Npas1P97459 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Npas1P97459 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Npas1P97459 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.08□□□□□ -0.64
Npas1P97459 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.08□□□□□ -0.64
Npas1P97459 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.08□□□□□ -0.64
Npas1P97459 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.08□□□□□ -0.64
Npas1P97459 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npas1P97459 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms