Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Gm38144-201ENSMUST00000192790 465 ntBASIC11.04□□□□□ -0.64
Pdlim4P70271 Gm9794-201ENSMUST00000202370 423 ntBASIC11.04□□□□□ -0.64
Pdlim4P70271 Gm9908-201ENSMUST00000211534 448 ntBASIC11.04□□□□□ -0.64
Pdlim4P70271 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pdlim4P70271 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pdlim4P70271 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.04□□□□□ -0.64
Pdlim4P70271 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Pdlim4P70271 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.04□□□□□ -0.64
Pdlim4P70271 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.04□□□□□ -0.64
Pdlim4P70271 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.04□□□□□ -0.64
Pdlim4P70271 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.04□□□□□ -0.64
Pdlim4P70271 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pdlim4P70271 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.03□□□□□ -0.64
Pdlim4P70271 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pdlim4P70271 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.03□□□□□ -0.64
Pdlim4P70271 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Pdlim4P70271 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.03□□□□□ -0.64
Pdlim4P70271 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.03□□□□□ -0.64
Pdlim4P70271 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.03□□□□□ -0.64
Pdlim4P70271 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.03□□□□□ -0.64
Pdlim4P70271 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.03□□□□□ -0.64
Pdlim4P70271 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.03□□□□□ -0.64
Pdlim4P70271 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.03□□□□□ -0.64
Pdlim4P70271 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Pdlim4P70271 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pdlim4P70271 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.03□□□□□ -0.64
Pdlim4P70271 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pdlim4P70271 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pdlim4P70271 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Pdlim4P70271 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Pdlim4P70271 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pdlim4P70271 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pdlim4P70271 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Pdlim4P70271 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pdlim4P70271 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.02□□□□□ -0.64
Pdlim4P70271 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.02□□□□□ -0.65
Pdlim4P70271 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Pdlim4P70271 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Pdlim4P70271 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.02□□□□□ -0.65
Pdlim4P70271 Gm15429-201ENSMUST00000151268 798 ntBASIC11.02□□□□□ -0.65
Pdlim4P70271 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Gm27701-201ENSMUST00000184498 110 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms