Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
Atxn1P54254 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Atxn1P54254 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.13□□□□□ -0.31
Atxn1P54254 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.13□□□□□ -0.31
Atxn1P54254 Gm14017-201ENSMUST00000121934 386 ntBASIC13.13□□□□□ -0.31
Atxn1P54254 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.13□□□□□ -0.31
Atxn1P54254 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.13□□□□□ -0.31
Atxn1P54254 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Atxn1P54254 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.13□□□□□ -0.31
Atxn1P54254 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.13□□□□□ -0.31
Atxn1P54254 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Atxn1P54254 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.13□□□□□ -0.31
Atxn1P54254 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.13□□□□□ -0.31
Atxn1P54254 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.13□□□□□ -0.31
Atxn1P54254 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Atxn1P54254 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Atxn1P54254 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Atxn1P54254 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.13□□□□□ -0.31
Atxn1P54254 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.13□□□□□ -0.31
Atxn1P54254 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atxn1P54254 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.12□□□□□ -0.31
Atxn1P54254 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.12□□□□□ -0.31
Atxn1P54254 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.12□□□□□ -0.31
Atxn1P54254 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.12□□□□□ -0.31
Atxn1P54254 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.12□□□□□ -0.31
Atxn1P54254 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Gm6222-202ENSMUST00000182143 629 ntBASIC13.12□□□□□ -0.31
Atxn1P54254 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.12□□□□□ -0.31
Atxn1P54254 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Gm10146-201ENSMUST00000072739 309 ntBASIC13.12□□□□□ -0.31
Atxn1P54254 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.12□□□□□ -0.31
Atxn1P54254 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.12□□□□□ -0.31
Atxn1P54254 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.12□□□□□ -0.31
Atxn1P54254 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atxn1P54254 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Gm4909-201ENSMUST00000118749 794 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms