Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Srp9P49962 Mir698-201ENSMUST00000102164 109 ntBASIC11.26□□□□□ -0.61
Srp9P49962 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Srp9P49962 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.26□□□□□ -0.61
Srp9P49962 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Srp9P49962 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Srp9P49962 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.26□□□□□ -0.61
Srp9P49962 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.26□□□□□ -0.61
Srp9P49962 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.26□□□□□ -0.61
Srp9P49962 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.26□□□□□ -0.61
Srp9P49962 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp9P49962 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Srp9P49962 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp9P49962 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Srp9P49962 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp9P49962 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Srp9P49962 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp9P49962 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.26□□□□□ -0.61
Srp9P49962 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Srp9P49962 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.26□□□□□ -0.61
Srp9P49962 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp9P49962 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp9P49962 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Srp9P49962 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp9P49962 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp9P49962 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp9P49962 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Srp9P49962 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.26□□□□□ -0.61
Srp9P49962 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp9P49962 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Srp9P49962 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Srp9P49962 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.25□□□□□ -0.61
Srp9P49962 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.25□□□□□ -0.61
Srp9P49962 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Gm38294-201ENSMUST00000192831 381 ntBASIC11.25□□□□□ -0.61
Srp9P49962 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.25□□□□□ -0.61
Srp9P49962 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.25□□□□□ -0.61
Srp9P49962 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Srp9P49962 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Srp9P49962 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Srp9P49962 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.25□□□□□ -0.61
Srp9P49962 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Srp9P49962 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.24□□□□□ -0.61
Srp9P49962 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Srp9P49962 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Srp9P49962 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Srp9P49962 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Srp9P49962 Mir6956-201ENSMUST00000183598 62 ntBASIC11.24□□□□□ -0.61
Srp9P49962 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.24□□□□□ -0.61
Srp9P49962 Gm44872-201ENSMUST00000207864 420 ntBASIC11.24□□□□□ -0.61
Srp9P49962 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Srp9P49962 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms