Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.94□□□□□ -0.18
Rfc1P35601 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rfc1P35601 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.94□□□□□ -0.18
Rfc1P35601 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfc1P35601 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rfc1P35601 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.93□□□□□ -0.18
Rfc1P35601 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.93□□□□□ -0.18
Rfc1P35601 Gm25287-201ENSMUST00000103846 110 ntBASIC13.93□□□□□ -0.18
Rfc1P35601 Gm22918-201ENSMUST00000103855 110 ntBASIC13.93□□□□□ -0.18
Rfc1P35601 Gm13015-201ENSMUST00000118674 204 ntBASIC13.93□□□□□ -0.18
Rfc1P35601 Gm14822-201ENSMUST00000122247 291 ntBASIC13.93□□□□□ -0.18
Rfc1P35601 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.93□□□□□ -0.18
Rfc1P35601 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.93□□□□□ -0.18
Rfc1P35601 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.93□□□□□ -0.18
Rfc1P35601 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.93□□□□□ -0.18
Rfc1P35601 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.93□□□□□ -0.18
Rfc1P35601 Gm24513-201ENSMUST00000174964 138 ntBASIC13.93□□□□□ -0.18
Rfc1P35601 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rfc1P35601 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Rfc1P35601 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.93□□□□□ -0.18
Rfc1P35601 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Rfc1P35601 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Rfc1P35601 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rfc1P35601 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.93□□□□□ -0.18
Rfc1P35601 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfc1P35601 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.92□□□□□ -0.18
Rfc1P35601 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Rfc1P35601 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rfc1P35601 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Rfc1P35601 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rfc1P35601 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Rfc1P35601 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Rfc1P35601 AA543401-201ENSMUST00000164248 1269 ntBASIC13.92□□□□□ -0.18
Rfc1P35601 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.92□□□□□ -0.18
Rfc1P35601 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Rfc1P35601 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.92□□□□□ -0.18
Rfc1P35601 Gm27397-201ENSMUST00000184997 107 ntBASIC13.92□□□□□ -0.18
Rfc1P35601 AA619741-201ENSMUST00000195095 646 ntBASIC13.92□□□□□ -0.18
Rfc1P35601 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Gm43125-201ENSMUST00000201724 730 ntBASIC13.92□□□□□ -0.18
Rfc1P35601 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Rfc1P35601 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.92□□□□□ -0.18
Rfc1P35601 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.92□□□□□ -0.18
Rfc1P35601 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.92□□□□□ -0.18
Rfc1P35601 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Rfc1P35601 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfc1P35601 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.92□□□□□ -0.18
Rfc1P35601 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.91□□□□□ -0.18
Rfc1P35601 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rfc1P35601 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rfc1P35601 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.91□□□□□ -0.18
Rfc1P35601 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Rfc1P35601 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rfc1P35601 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rfc1P35601 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms