Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gja4P28235 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gja4P28235 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gja4P28235 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gja4P28235 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gja4P28235 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gja4P28235 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gja4P28235 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gja4P28235 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gja4P28235 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gja4P28235 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gja4P28235 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.17□□□□□ -0.3
Gja4P28235 Snord83b-201ENSMUST00000104546 94 ntBASIC13.17□□□□□ -0.3
Gja4P28235 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.17□□□□□ -0.3
Gja4P28235 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.17□□□□□ -0.3
Gja4P28235 Gm22121-201ENSMUST00000175148 54 ntBASIC13.17□□□□□ -0.3
Gja4P28235 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.17□□□□□ -0.3
Gja4P28235 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gja4P28235 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.17□□□□□ -0.3
Gja4P28235 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.17□□□□□ -0.3
Gja4P28235 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.17□□□□□ -0.3
Gja4P28235 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.17□□□□□ -0.3
Gja4P28235 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.17□□□□□ -0.3
Gja4P28235 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.17□□□□□ -0.3
Gja4P28235 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gja4P28235 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gja4P28235 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gja4P28235 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gja4P28235 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.16□□□□□ -0.3
Gja4P28235 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Gja4P28235 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Gja4P28235 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gja4P28235 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.16□□□□□ -0.3
Gja4P28235 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.16□□□□□ -0.3
Gja4P28235 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.16□□□□□ -0.3
Gja4P28235 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.16□□□□□ -0.3
Gja4P28235 Gm26461-201ENSMUST00000175064 290 ntBASIC13.16□□□□□ -0.3
Gja4P28235 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.16□□□□□ -0.3
Gja4P28235 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.16□□□□□ -0.3
Gja4P28235 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Gja4P28235 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.16□□□□□ -0.3
Gja4P28235 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Gja4P28235 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.16□□□□□ -0.3
Gja4P28235 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gja4P28235 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.16□□□□□ -0.3
Gja4P28235 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gja4P28235 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gja4P28235 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms