Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Gm5161-201ENSMUST00000075243 853 ntBASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfrsf1aP25118 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm15678-201ENSMUST00000117573 960 ntBASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm14719-201ENSMUST00000121891 340 ntBASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm24694-201ENSMUST00000180054 110 ntBASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm27663-201ENSMUST00000184839 110 ntBASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm24447-201ENSMUST00000083977 338 ntBASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfrsf1aP25118 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Tnfrsf1aP25118 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.08□□□□□ -0.63
Tnfrsf1aP25118 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Tnfrsf1aP25118 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Tnfrsf1aP25118 Gm38144-201ENSMUST00000192790 465 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms