Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
P01728 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
P01728 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.35□□□□□ -0.75
P01728 Shd-206ENSMUST00000225145 998 ntBASIC10.35□□□□□ -0.75
P01728 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.35□□□□□ -0.75
P01728 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.35□□□□□ -0.75
P01728 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
P01728 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.35□□□□□ -0.75
P01728 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.35□□□□□ -0.75
P01728 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.35□□□□□ -0.75
P01728 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
P01728 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P01728 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P01728 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
P01728 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.34□□□□□ -0.75
P01728 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
P01728 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
P01728 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.34□□□□□ -0.75
P01728 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.34□□□□□ -0.75
P01728 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
P01728 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.34□□□□□ -0.75
P01728 Gm15467-201ENSMUST00000120582 445 ntBASIC10.34□□□□□ -0.75
P01728 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.34□□□□□ -0.75
P01728 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.34□□□□□ -0.75
P01728 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.34□□□□□ -0.75
P01728 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.34□□□□□ -0.75
P01728 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC10.34□□□□□ -0.75
P01728 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
P01728 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.34□□□□□ -0.75
P01728 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P01728 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.34□□□□□ -0.75
P01728 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
P01728 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P01728 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P01728 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P01728 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P01728 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.33□□□□□ -0.76
P01728 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P01728 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P01728 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P01728 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms