Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Gm23931-201ENSMUST00000103842 109 ntBASIC14.26□□□□□ -0.13
Vti1aO89116 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Vti1aO89116 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Vti1aO89116 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.26□□□□□ -0.13
Vti1aO89116 Gm19184-201ENSMUST00000196798 928 ntBASIC14.26□□□□□ -0.13
Vti1aO89116 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.26□□□□□ -0.13
Vti1aO89116 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.26□□□□□ -0.13
Vti1aO89116 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.26□□□□□ -0.13
Vti1aO89116 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.26□□□□□ -0.13
Vti1aO89116 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vti1aO89116 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vti1aO89116 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Vti1aO89116 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Vti1aO89116 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Gm13369-201ENSMUST00000119442 987 ntBASIC14.25□□□□□ -0.13
Vti1aO89116 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.25□□□□□ -0.13
Vti1aO89116 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vti1aO89116 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.25□□□□□ -0.13
Vti1aO89116 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Vti1aO89116 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Gm37008-201ENSMUST00000195712 319 ntBASIC14.25□□□□□ -0.13
Vti1aO89116 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.25□□□□□ -0.13
Vti1aO89116 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Vti1aO89116 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.25□□□□□ -0.13
Vti1aO89116 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vti1aO89116 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.24□□□□□ -0.13
Vti1aO89116 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vti1aO89116 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vti1aO89116 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Gm5687-201ENSMUST00000118252 640 ntBASIC14.24□□□□□ -0.13
Vti1aO89116 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.24□□□□□ -0.13
Vti1aO89116 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.24□□□□□ -0.13
Vti1aO89116 Gm18054-201ENSMUST00000207539 555 ntBASIC14.24□□□□□ -0.13
Vti1aO89116 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Gm9823-201ENSMUST00000051212 327 ntBASIC14.24□□□□□ -0.13
Vti1aO89116 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Vti1aO89116 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vti1aO89116 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.24□□□□□ -0.13
Vti1aO89116 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.24□□□□□ -0.13
Vti1aO89116 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vti1aO89116 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vti1aO89116 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vti1aO89116 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.24□□□□□ -0.13
Vti1aO89116 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms