Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Cops4O88544 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.21□□□□□ -0.45
Cops4O88544 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Cops4O88544 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.21□□□□□ -0.45
Cops4O88544 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Gm5779-201ENSMUST00000218467 910 ntBASIC12.21□□□□□ -0.45
Cops4O88544 Chchd1-203ENSMUST00000224633 557 ntBASIC12.21□□□□□ -0.45
Cops4O88544 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.21□□□□□ -0.45
Cops4O88544 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cops4O88544 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cops4O88544 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cops4O88544 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.21□□□□□ -0.46
Cops4O88544 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cops4O88544 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cops4O88544 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cops4O88544 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cops4O88544 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cops4O88544 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cops4O88544 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.21□□□□□ -0.46
Cops4O88544 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cops4O88544 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cops4O88544 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cops4O88544 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cops4O88544 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.2□□□□□ -0.46
Cops4O88544 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cops4O88544 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.2□□□□□ -0.46
Cops4O88544 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cops4O88544 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.2□□□□□ -0.46
Cops4O88544 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cops4O88544 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Cops4O88544 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.2□□□□□ -0.46
Cops4O88544 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.2□□□□□ -0.46
Cops4O88544 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Cops4O88544 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.2□□□□□ -0.46
Cops4O88544 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.2□□□□□ -0.46
Cops4O88544 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Cops4O88544 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Cops4O88544 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cops4O88544 Matn2-203ENSMUST00000226766 3252 ntBASIC12.2□□□□□ -0.46
Cops4O88544 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Cops4O88544 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cops4O88544 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cops4O88544 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cops4O88544 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.19□□□□□ -0.46
Cops4O88544 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Cops4O88544 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms