Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm9083-201ENSMUST00000120423 819 ntBASIC16.82■□□□□ 0.28
Ubr1O70481 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC16.82■□□□□ 0.28
Ubr1O70481 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.82■□□□□ 0.28
Ubr1O70481 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.82■□□□□ 0.28
Ubr1O70481 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.82■□□□□ 0.28
Ubr1O70481 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.82■□□□□ 0.28
Ubr1O70481 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Ubr1O70481 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.82■□□□□ 0.28
Ubr1O70481 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ubr1O70481 Gm14999-201ENSMUST00000121039 624 ntBASIC16.82■□□□□ 0.28
Ubr1O70481 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 Gm42937-201ENSMUST00000197360 752 ntBASIC16.82■□□□□ 0.28
Ubr1O70481 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ubr1O70481 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.81■□□□□ 0.28
Ubr1O70481 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.81■□□□□ 0.28
Ubr1O70481 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ubr1O70481 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Ubr1O70481 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ubr1O70481 Gm13296-201ENSMUST00000117854 997 ntBASIC16.81■□□□□ 0.28
Ubr1O70481 Gm12566-201ENSMUST00000121479 359 ntBASIC16.81■□□□□ 0.28
Ubr1O70481 Gm7003-201ENSMUST00000195089 312 ntBASIC16.81■□□□□ 0.28
Ubr1O70481 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC16.81■□□□□ 0.28
Ubr1O70481 Gm9555-201ENSMUST00000200908 583 ntBASIC16.81■□□□□ 0.28
Ubr1O70481 Gm19187-201ENSMUST00000206781 892 ntBASIC16.81■□□□□ 0.28
Ubr1O70481 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ubr1O70481 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.81■□□□□ 0.28
Ubr1O70481 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ubr1O70481 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ubr1O70481 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ubr1O70481 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Ubr1O70481 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ubr1O70481 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ubr1O70481 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.8■□□□□ 0.28
Ubr1O70481 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.8■□□□□ 0.28
Ubr1O70481 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
Ubr1O70481 Gm5863-201ENSMUST00000121760 1008 ntBASIC16.8■□□□□ 0.28
Ubr1O70481 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC16.8■□□□□ 0.28
Ubr1O70481 Gm23119-201ENSMUST00000158610 140 ntBASIC16.8■□□□□ 0.28
Ubr1O70481 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC16.8■□□□□ 0.28
Ubr1O70481 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC16.8■□□□□ 0.28
Ubr1O70481 Gm19208-201ENSMUST00000213861 912 ntBASIC16.8■□□□□ 0.28
Ubr1O70481 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Ubr1O70481 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.8■□□□□ 0.28
Ubr1O70481 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ubr1O70481 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ubr1O70481 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ubr1O70481 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ubr1O70481 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms