Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag2O35638 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Stag2O35638 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Stag2O35638 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Stag2O35638 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Stag2O35638 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Stag2O35638 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Gm12957-201ENSMUST00000117835 377 ntBASIC15.13■□□□□ 0.01
Stag2O35638 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.13■□□□□ 0.01
Stag2O35638 Gm16479-201ENSMUST00000121706 932 ntBASIC15.13■□□□□ 0.01
Stag2O35638 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.13■□□□□ 0.01
Stag2O35638 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.13■□□□□ 0.01
Stag2O35638 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Stag2O35638 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.13■□□□□ 0.01
Stag2O35638 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag2O35638 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Stag2O35638 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.12■□□□□ 0.01
Stag2O35638 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.12■□□□□ 0.01
Stag2O35638 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Stag2O35638 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Stag2O35638 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Stag2O35638 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Stag2O35638 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Stag2O35638 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.12■□□□□ 0.01
Stag2O35638 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Stag2O35638 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Stag2O35638 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag2O35638 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag2O35638 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag2O35638 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag2O35638 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.11■□□□□ 0.01
Stag2O35638 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag2O35638 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Stag2O35638 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Stag2O35638 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.11■□□□□ 0.01
Stag2O35638 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.11■□□□□ 0.01
Stag2O35638 Gm37424-201ENSMUST00000191727 561 ntBASIC15.11■□□□□ 0.01
Stag2O35638 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.11■□□□□ 0.01
Stag2O35638 Gm43438-201ENSMUST00000198133 379 ntBASIC15.11■□□□□ 0.01
Stag2O35638 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.11■□□□□ 0.01
Stag2O35638 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Stag2O35638 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Stag2O35638 Gm10268-201ENSMUST00000085340 555 ntBASIC15.11■□□□□ 0.01
Stag2O35638 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.11■□□□□ 0.01
Stag2O35638 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag2O35638 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag2O35638 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Stag2O35638 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Stag2O35638 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Stag2O35638 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag2O35638 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Stag2O35638 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag2O35638 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.1■□□□□ 0.01
Stag2O35638 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag2O35638 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag2O35638 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Stag2O35638 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag2O35638 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Stag2O35638 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Stag2O35638 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Stag2O35638 Snora78-201ENSMUST00000158630 128 ntBASIC15.1■□□□□ 0.01
Stag2O35638 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.1■□□□□ 0.01
Stag2O35638 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.1■□□□□ 0.01
Stag2O35638 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Stag2O35638 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.1■□□□□ 0.01
Stag2O35638 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.1■□□□□ 0.01
Stag2O35638 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms