Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Efnb3O35393 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.47□□□□□ -0.73
Efnb3O35393 Gm15460-201ENSMUST00000118147 391 ntBASIC10.47□□□□□ -0.73
Efnb3O35393 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Efnb3O35393 AC153872.1-201ENSMUST00000199539 128 ntBASIC10.47□□□□□ -0.73
Efnb3O35393 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Efnb3O35393 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.47□□□□□ -0.73
Efnb3O35393 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.47□□□□□ -0.73
Efnb3O35393 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Efnb3O35393 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Efnb3O35393 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Efnb3O35393 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Efnb3O35393 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Efnb3O35393 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Efnb3O35393 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Efnb3O35393 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Efnb3O35393 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Efnb3O35393 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Efnb3O35393 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Efnb3O35393 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Efnb3O35393 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Efnb3O35393 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Efnb3O35393 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Efnb3O35393 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.46□□□□□ -0.73
Efnb3O35393 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Efnb3O35393 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.46□□□□□ -0.73
Efnb3O35393 Gm12428-201ENSMUST00000119844 727 ntBASIC10.46□□□□□ -0.73
Efnb3O35393 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Efnb3O35393 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.46□□□□□ -0.73
Efnb3O35393 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Efnb3O35393 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.46□□□□□ -0.73
Efnb3O35393 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Efnb3O35393 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.46□□□□□ -0.73
Efnb3O35393 Gm45841-201ENSMUST00000207700 164 ntBASIC10.46□□□□□ -0.73
Efnb3O35393 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.46□□□□□ -0.73
Efnb3O35393 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Efnb3O35393 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.46□□□□□ -0.73
Efnb3O35393 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.46□□□□□ -0.73
Efnb3O35393 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.46□□□□□ -0.73
Efnb3O35393 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Efnb3O35393 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Efnb3O35393 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.46□□□□□ -0.74
Efnb3O35393 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Efnb3O35393 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Efnb3O35393 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Efnb3O35393 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Efnb3O35393 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Efnb3O35393 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.46□□□□□ -0.74
Efnb3O35393 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.46□□□□□ -0.74
Efnb3O35393 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Efnb3O35393 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.46□□□□□ -0.74
Efnb3O35393 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Efnb3O35393 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Efnb3O35393 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Efnb3O35393 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Efnb3O35393 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Efnb3O35393 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Efnb3O35393 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Efnb3O35393 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Efnb3O35393 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Efnb3O35393 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Efnb3O35393 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.45□□□□□ -0.74
Efnb3O35393 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Efnb3O35393 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.45□□□□□ -0.74
Efnb3O35393 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.45□□□□□ -0.74
Efnb3O35393 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms