Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col15a1O35206 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col15a1O35206 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col15a1O35206 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col15a1O35206 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col15a1O35206 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col15a1O35206 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.77■□□□□ 0.28
Col15a1O35206 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col15a1O35206 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col15a1O35206 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col15a1O35206 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col15a1O35206 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col15a1O35206 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC16.77■□□□□ 0.28
Col15a1O35206 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.77■□□□□ 0.28
Col15a1O35206 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col15a1O35206 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Col15a1O35206 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Col15a1O35206 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col15a1O35206 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col15a1O35206 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col15a1O35206 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col15a1O35206 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col15a1O35206 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.77■□□□□ 0.27
Col15a1O35206 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col15a1O35206 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col15a1O35206 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col15a1O35206 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col15a1O35206 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col15a1O35206 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Col15a1O35206 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.77■□□□□ 0.27
Col15a1O35206 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col15a1O35206 Gm13996-201ENSMUST00000118456 430 ntBASIC16.77■□□□□ 0.27
Col15a1O35206 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC16.77■□□□□ 0.27
Col15a1O35206 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Col15a1O35206 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col15a1O35206 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Col15a1O35206 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col15a1O35206 Gm7003-201ENSMUST00000195089 312 ntBASIC16.77■□□□□ 0.27
Col15a1O35206 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.77■□□□□ 0.27
Col15a1O35206 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC16.77■□□□□ 0.27
Col15a1O35206 Gm45925-201ENSMUST00000218882 744 ntBASIC16.77■□□□□ 0.27
Col15a1O35206 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC16.77■□□□□ 0.27
Col15a1O35206 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col15a1O35206 AC123665.1-201ENSMUST00000228204 438 ntBASIC16.77■□□□□ 0.27
Col15a1O35206 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Col15a1O35206 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Col15a1O35206 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.76■□□□□ 0.27
Col15a1O35206 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Col15a1O35206 Gm9083-201ENSMUST00000120423 819 ntBASIC16.76■□□□□ 0.27
Col15a1O35206 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC16.76■□□□□ 0.27
Col15a1O35206 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC16.76■□□□□ 0.27
Col15a1O35206 Gm24845-201ENSMUST00000158034 109 ntBASIC16.76■□□□□ 0.27
Col15a1O35206 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC16.76■□□□□ 0.27
Col15a1O35206 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Col15a1O35206 Gm28450-201ENSMUST00000187349 638 ntBASIC16.76■□□□□ 0.27
Col15a1O35206 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.76■□□□□ 0.27
Col15a1O35206 Gm43947-201ENSMUST00000203019 959 ntBASIC16.76■□□□□ 0.27
Col15a1O35206 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC16.76■□□□□ 0.27
Col15a1O35206 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 AC108416.1-202ENSMUST00000228927 1201 ntBASIC16.76■□□□□ 0.27
Col15a1O35206 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Col15a1O35206 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col15a1O35206 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Col15a1O35206 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Col15a1O35206 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 Gm6652-201ENSMUST00000186414 1070 ntBASIC16.75■□□□□ 0.27
Col15a1O35206 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC16.75■□□□□ 0.27
Col15a1O35206 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC16.75■□□□□ 0.27
Col15a1O35206 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Col15a1O35206 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col15a1O35206 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms