Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trove2O08848 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.61□□□□□ -0.23
Trove2O08848 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.61□□□□□ -0.23
Trove2O08848 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Trove2O08848 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trove2O08848 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.61□□□□□ -0.23
Trove2O08848 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.61□□□□□ -0.23
Trove2O08848 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trove2O08848 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trove2O08848 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trove2O08848 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.6□□□□□ -0.23
Trove2O08848 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.6□□□□□ -0.23
Trove2O08848 Gm15653-201ENSMUST00000119247 907 ntBASIC13.6□□□□□ -0.23
Trove2O08848 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Mir1897-201ENSMUST00000122581 272 ntBASIC13.6□□□□□ -0.23
Trove2O08848 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trove2O08848 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.6□□□□□ -0.23
Trove2O08848 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trove2O08848 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.6□□□□□ -0.23
Trove2O08848 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Gm6916-202ENSMUST00000205523 195 ntBASIC13.6□□□□□ -0.23
Trove2O08848 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.6□□□□□ -0.23
Trove2O08848 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trove2O08848 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trove2O08848 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trove2O08848 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.59□□□□□ -0.23
Trove2O08848 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trove2O08848 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.59□□□□□ -0.23
Trove2O08848 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.59□□□□□ -0.23
Trove2O08848 Gm29741-201ENSMUST00000192667 421 ntBASIC13.59□□□□□ -0.23
Trove2O08848 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trove2O08848 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.59□□□□□ -0.23
Trove2O08848 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Trove2O08848 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.59□□□□□ -0.23
Trove2O08848 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trove2O08848 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.58□□□□□ -0.23
Trove2O08848 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trove2O08848 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trove2O08848 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trove2O08848 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Trove2O08848 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trove2O08848 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Trove2O08848 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trove2O08848 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.58□□□□□ -0.24
Trove2O08848 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trove2O08848 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trove2O08848 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trove2O08848 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Trove2O08848 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms