Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cntnap3E9PY62 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cntnap3E9PY62 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.51□□□□□ -0.09
Cntnap3E9PY62 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.51□□□□□ -0.09
Cntnap3E9PY62 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cntnap3E9PY62 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cntnap3E9PY62 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cntnap3E9PY62 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cntnap3E9PY62 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cntnap3E9PY62 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cntnap3E9PY62 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cntnap3E9PY62 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.51□□□□□ -0.09
Cntnap3E9PY62 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Gm44651-201ENSMUST00000207343 372 ntBASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntnap3E9PY62 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Gm18730-201ENSMUST00000218038 343 ntBASIC14.49□□□□□ -0.09
Cntnap3E9PY62 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntnap3E9PY62 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Gm14460-201ENSMUST00000121511 639 ntBASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.48□□□□□ -0.09
Cntnap3E9PY62 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms