Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Gm27572-201ENSMUST00000183702 255 ntBASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh17E9PXF0 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.32□□□□□ -0.44
Pcdh17E9PXF0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Gm27682-201ENSMUST00000183930 110 ntBASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pcdh17E9PXF0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms