Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.8□□□□□ -0.2
Scn1aA2APX8 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scn1aA2APX8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.79□□□□□ -0.2
Scn1aA2APX8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Mir874-201ENSMUST00000104769 76 ntBASIC13.79□□□□□ -0.2
Scn1aA2APX8 Gm15198-201ENSMUST00000117283 177 ntBASIC13.79□□□□□ -0.2
Scn1aA2APX8 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Gm45331-201ENSMUST00000209868 554 ntBASIC13.79□□□□□ -0.2
Scn1aA2APX8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn1aA2APX8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.78□□□□□ -0.2
Scn1aA2APX8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.78□□□□□ -0.2
Scn1aA2APX8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Gm7399-201ENSMUST00000032395 858 ntBASIC13.78□□□□□ -0.2
Scn1aA2APX8 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.78□□□□□ -0.2
Scn1aA2APX8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Gm17208-201ENSMUST00000168388 535 ntBASIC13.78□□□□□ -0.2
Scn1aA2APX8 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn1aA2APX8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.77□□□□□ -0.2
Scn1aA2APX8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn1aA2APX8 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.77□□□□□ -0.21
Scn1aA2APX8 Gm13786-201ENSMUST00000122371 333 ntBASIC13.77□□□□□ -0.21
Scn1aA2APX8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Gm16379-201ENSMUST00000161469 348 ntBASIC13.77□□□□□ -0.21
Scn1aA2APX8 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Gm8762-201ENSMUST00000193486 339 ntBASIC13.77□□□□□ -0.21
Scn1aA2APX8 Gm37008-201ENSMUST00000195712 319 ntBASIC13.77□□□□□ -0.21
Scn1aA2APX8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms